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Phylogenetic relations of the dinoflagellate Gymnodinium baicalense from Lake Baikal

Freshwater dinoflagellates still remain poorly studied by modern biological methods. This lack of knowledge prevents us from understanding the evolution and colonization patterns of these ecologically important protists. Gymnodinium baicalense is the most abundant, and possibly endemic, planktonic dinoflagellate from the ancient Lake Baikal. This dinoflagellate species blooms in the spring under t

The Development of Severe Neonatal Alloimmune Thrombocytopenia due to Anti-HPA-1a Antibodies Is Correlated to Maternal ABO Genotypes

Background. Maternal alloantibodies against HPA-1a can cross placenta, opsonize foetal platelets, and induce neonatal alloimmune thrombocytopenia (NAIT). In a study of 100, 448 pregnant women in Norway during 1995-2004, 10.6% of HPA-1a negative women had detectable anti-HPA-1a antibodies. Design and Methods. A possible correlation between the maternal ABO blood group phenotype, or underlying genot

Palaeoclimate perturbations before the Sheinwoodian glaciation: A trigger for extinctiond during the 'Ireviken Event'

Telychian to Sheinwoodian conodonts (Pterospathodus eopennatus ssp. n. 1 Zone through the Ozarkodina sagitta rhenana Superzone) were studied in detail for their oxygen isotope composition. The Upper Kockelella ranuliformis and Ozarkodina sagitta rhenana Zones represent the peak interval of the Sheinwoodian positive δ18Oapatite excursion reflecting the coolest conditions with marine sea–water tempe

Anomalous celestial polarization caused by forest fire smoke: why do some insects become visually disoriented under smoky skies?

The effects of forest fire smoke on sky polarization and animal orientation are practically unknown. Using full-sky imaging polarimetry, we therefore measured the celestial polarization pattern under a smoky sky in Fairbanks, Alaska, during the forest fire season in August 2005. It is quantitatively documented here that the celestial polarization, a sky attribute that is necessary for orientation

Binding effects in multivalent Gibbs-Donnan equilibrium

The classical Gibbs-Donnan equilibrium describes excess osmotic pressure associated with confined colloidal charges embedded in an electrolyte solution. In this work, we extend this approach to describe the influence of multivalent ion binding on the equilibrium force acting on a charged rod translocating between two compartments, thereby mimicking ionic effects on force balance during in vitro DN

Calibrated pollen accumulation rates as a basis for quantitative tree biomass reconstructions

Recent investigations show that the pollen accumulation rate (PAR) of the common tree taxa is directly related to the biomass and, by inference, to the population size of the taxa around the study site. Fossil PAR records preserved in lakes provide therefore a potential proxy for quantitative biomass and population reconstructions. We use the high-resolution PAR records obtained from two accuratel

Common variants in LSP1, 2q35 and 8q24 and breast cancer risk for BRCA1 and BRCA2 mutation carriers

Genome-wide association studies of breast cancer have identified multiple single nucleotide polymorphisms (SNPs) that are associated with increased breast cancer risks in the general population. In a previous study, we demonstrated that the minor alleles at three of these SNPs, in FGFR2, TNRC9 and MAP3K1, also confer increased risks of breast cancer for BRCA1 or BRCA2 mutation carriers. Three addi

Implications of the view of programs as formal systems

The prevailing view of software development as the production of program systems is abandoned in favor of software development as theory building. This suggests that software development properly should be regarded as a deductive activity following the same methodology as is used in all deductive sciences. Programming is merely the description process in the activity of building theories about thi

Imaging Ultrafast Demagnetization Dynamics after a Spatially Localized Optical Excitation

Ultrashort, coherent x-ray pulses of a free-electron laser are used to holographically image the magnetization dynamics within a magnetic domain pattern after creation of a localized excitation via an optical standing wave. We observe a spatially confined reduction of the magnetization within a couple of hundred femtoseconds followed by its slower recovery. Additionally, the experimental results s

Force chains in monodisperse spherical particle assemblies: Three-dimensional measurements using neutrons.

The full triaxial stress state within individual particles in a monodisperse spherical granular assembly has been measured. This was made possible by neutron imaging and computed tomography combined with neutron diffraction strain measurement techniques and associated stress reconstruction. The assembly in question consists of 549 precision steel ball bearings under an applied axial load of 85 MPa

Stress-related challenges in pentose fermentation to ethanol by the yeast Saccharomyces cerevisiae.

Conversion of agricultural residues, energy crops and forest residues into bioethanol requires hydrolysis of the biomass and fermentation of the released sugars. During the hydrolysis of the hemicellulose fraction, substantial amounts of pentose sugars, in particular xylose, are released. Fermentation of these pentose sugars to ethanol by engineered Saccharomyces cerevisiae under industrial proces

Cost of multiple sclerosis in the Czech Republic: The COMS study

Background: Information about cost of multiple sclerosis (MS) is available from a number of European countries, but no data from the Czech Republic have been published so far. Objective: The objective of this study was to establish the cost of MS in the Czech Republic, overall and by level of disease severity. Methods: Data on demographics, disease history, resource consumption and production loss

An integrative genomics screen uncovers ncRNA T-UCR functions in neuroblastoma tumours

Different classes of non-coding RNAs, including microRNAs, have recently been implicated in the process of tumourigenesis. In this study, we examined the expression and putative functions of a novel class of non-coding RNAs known as transcribed ultraconserved regions (T-UCRs) in neuroblastoma. Genome-wide expression pro. ling revealed correlations between specific T-UCR expression levels and impor

Diagnostic and prognostic significance of proteinuria selectivity index in glomerular diseases

The proteinuria selectivity index (SI) describes changes of the glomerular permeability for macromolecules. In the present study, we examine the implications of SI as a diagnostic (199 patients) and a prognostic (49 patients) marker in glomerular diseases. Using SI based on alpha(2)-macroglobulin (alpha(2)-M-SI) or on IgM (IgM-SI) we found that minimal change nephropathy could be discriminated by

Genome-based identification and analysis of collagen-related structural motifs in bacterial and viral proteins.

Collagens are extended trimeric proteins composed of the repetitive sequence glycine-X-Y. A (c) under bar ollagen- related (S) under bar tructural (m) under bar otif (CSM) containing glycine-X-Y repeats is also found in numerous proteins often referred to as collagen-like proteins. Little is known about CSMs in bacteria and viruses, but the occurrence of such motifs has recently been demonstrated.

Multiple HIV-1 introductions into the Swedish intravenous drug user population

In 2001, an increase of HIV-1 diagnoses among intravenous drug users (IVDU) was reported in Sweden. In nearby countries, Finland, Russia and the Baltic states, recent outbreaks had been described. Since there was a concern that these outbreaks would carry over to Sweden a study was initiated to determine the factors leading to the Swedish increase of HIV-1 diagnosed IVDUs. HIV-1 env V3 sequences w

Concise Review: Hematopoietic Stem Cell Aging and the Prospects for Rejuvenation.

Because of the continuous increases in lifetime expectancy, the incidence of age-related diseases will, unless counteracted, represent an increasing problem at both the individual and socioeconomic levels. Studies on the processes of blood cell formation have revealed several shortcomings as a consequence of chronological age. They include a reduced ability to mount adaptive immune responses and a