Evaluating Variant Calling Pipelines for RNA-seq Data
RNA-seq has become a revolutionary tool for genome-wide gene expression analysis, opening new possibilities for research. This study focuses on using RNA-seq data for variant calling at Single Nucleotide Polymorphisms in a non-model organism, the bank vole. Variant calling from RNA-seq can for example be used for Allele-Specific Expression (ASE) analysis which sheds light on the impact of genetic