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(1)H and hyperpolarized (3)He MR imaging of mouse with LPS-induced inflammation

PURPOSE: To evaluate the lipopolysaccharide (LPS) model of chronic obstructive pulmonary disease (COPD) in mouse with (1)H and hyperpolarized (HP) (3)He MR imaging.MATERIALS AND METHODS: Axial slices of the lung volume were acquired with HP (3)He and (1)H MRI at 4, 24, and 48 h after LPS exposure. A quantitative ventilation index was calculated from two HP (3)He acquisitions. A bronchoalveolar lav

Interleaved echo-planar imaging for fast multiplanar magnetic resonance temperature imaging of ultrasound thermal ablation therapy

PURPOSE: To develop a multiplanar magnetic resonance temperature imaging (MRTI) technique based on interleaved gradient-echo echo-planar imaging (EPI), verify in phantom, develop software tools to process and display data on a clinical scanner in near real-time, and demonstrate feasibility to monitor ultrasound thermal ablation therapy in vivo.MATERIALS AND METHODS: Temperature estimation used com

Verification of single beam treatment planning using a ferrous dosimeter gel and MRI (FeMRI)

A method for analysing and comparing treatment planning system (TPS) data and ferrous dosimeter gel measurements evaluated with MRI (FeMRI) was developed, including image processing to final absorbed dose images. Measurements were analysed according to this method and FeMRI data were thereby compared with the TPS-calculated dose distribution. For photons, differences between FeMRI- and TPS dose da

Improvements in absorbed dose measurements for external radiation therapy using ferrous dosimeter gel and MR imaging (FeMRI)

A ferrous gel, based on ferrous (Fe) sulphate and agarose, was used with a clinical magnetic resonance imaging (MRI) scanner to obtain relative dose distribution data from therapeutic photon and electron beams. The FeMRI gel was scanned using a new MRI acquisition protocol optimized for T1 measurements. Thorough comparisons with silicon semiconductor detector and ionization chamber measurements, a

Three-dimensional dose mapping from gamma knife treatment using a dosimeter gel and MR-imaging

A new method has been investigated for the mapping of dose distributions in three dimensions delivered by the Leksell gamma knife. The irradiation unit is used to selectively treat small volumes in the brain with single high doses of ionising radiation--a treatment procedure known as radiosurgery. The dosimetry method investigated utilises a dosimeter gel consisting of ferrous sulphate solution an

Tomographic scintigraphy using a pinhole collimator and a rotating gamma camera

When a pinhole collimator is to be used for tomographic studies the standard SPECT software has to be modified so as to avoid serious image distortion outside the axis of rotation. The MTF measured at the axis of rotation shows that the better resolution of the pinhole collimator as compared with that of a parallel-hole collimator improves the tomographic image. The low sensitivity of the pinhole

Structures in High-Dimensional Data: Intrinsic Dimension and Cluster Analysis

With today's improved measurement and data storing technologies it has become common to collect data in search for hypotheses instead of for testing hypotheses---to do exploratory data analysis. Finding patterns and structures in data is the main goal. This thesis deals with two kinds of structures that can convey relationships between different parts of data in a high-dimensional space: manifolds

Comprehensive Transcriptional Analysis of Early-Stage Urothelial Carcinoma

Non-muscle-invasive bladder cancer (NMIBC) is a heterogeneous disease with widely different outcomes. We performed a comprehensive transcriptional analysis of 460 early-stage urothelial carcinomas and showed that NMIBC can be subgrouped into three major classes with basal- and luminal-like characteristics and different clinical outcomes. Large differences in biological processes such as the cell c

Prognostic impact of circulating tumor cell apoptosis and clusters in serial blood samples from patients with metastatic breast cancer in a prospective observational cohort

Background: Presence of circulating tumor cells (CTCs) is a validated prognostic marker in metastatic breast cancer. Additional prognostic information may be obtained by morphologic characterization of CTCs. We explored whether apoptotic CTCs, CTC clusters and leukocytes attached to CTCs are associated with breast cancer subtype and prognosis at base-line (BL) and in follow-up (FU) blood samples i

Local interactions and protein folding : A three-dimensional off-lattice approach

The thermodynamic behavior of a three-dimensional off-lattice model for protein folding is probed. The model has only two types of residues, hydrophobia and hydrophilic. In absence of local interactions, native structure formation does not occur for the temperatures considered. By including sequence independent local interactions, which qualitatively reproduce local properties of functional protei

Blind Beamforming Using Parallel Single-channel Speech Enhancers

This paper presents an idea to extend a certain class of single channel speech enhancement algorithms to include the spatial domain. The resulting blind beamformer does not rely on a-priori knowledge of source and sensor positions and it enhances one or several speech sources based only on received data. The underlying principle in this approach is the fact that speech signals are short time stati

Online Blind Speech Extraction based on a Locally Quadratic Kurtosis Criteria and a Preprocessing Automatic Gain Controller

This paper focuses on realtime speech extraction using blind adaptive beamforming. The speech extraction is carried out using an approximation of the kurtosis measure in a subband domain. The introduced kurtosis approximation is an improvement of a recently proposed approximation technique where a locally quadratic criterion was solved at each iteration. The improvement introduced in this paper re

Human echolocation using click trains and continuous noise

Blind people may detect objects from the information in reflected sounds, echolocation. Detection as a function of the number of clicks compared to a continuous noise was tested by presenting clicks of 5 ms with rates from 1 to 64 clicks during a 500 ms period and a 500-ms continuous white noise. The sounds were recorded in an ordinary room through an artificial binaural head. The reflecting objec

Adaptive Microphone Array Employing Spatial Quadratic Soft Constraints and Spectral Shaping

The convenience and the ease of use provided by hands-free operation of speech communication devices mean that speech enhancement schemes are becoming indispensable. In this chapter, two subband adaptive microphone array schemes are presented, which aim to provide good speech enhancement capability in poor signal to noise ratio situations. The basic commonality of the adaptive microphone array sch

Signal extraction

The invention relates to an adaptive method of extracting at least of des ired electro magnetic wave signals, sound wave signals (40, 42), and any oth er signals from a mixture of signals (40, 42, 44, 46) and suppressing noise and interfering signals to produce enhanced signals (50) corresponding to de sired (10) signals, and an apparatus (70) therefore. It relies on the concep t of at least one o

The use of operator factorization for linear control and estimation

The linear filtering, prediction and smoothing problems as well as the linear quadratic control problems can very generally be formulated as operator equations using basic linear algebra.The equations are of Fredholm type II, and they are difficult to solve directly.It is shown how the operator can be factorized into two Volterra operators using a matrix Riccati equation. Recursive solution of the