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The discoidin domain family revisited : new members from prokaryotes and a homology-based fold prediction
Members of the discoidin (DS) domain family, which includes the C1 and C2 repeats of blood coagulation factors V and VIII, occur in a great variety of eukaryotic proteins, most of which have been implicated in cell-adhesion or developmental processes. So far, no three-dimensional structure of a known example of this extracellular module has been determined, limiting the usefulness of identifying a
The Extended DIRNDL Corpus as a Resource for Coreference and Bridging Resolution
Novel tenascin variants with a distinctive pattern of expression in the avian embryo
Previous studies have shown that several forms of the glycoprotein tenascin are present in the embryonic extracellular matrix. These forms are the result of alternative splicing, which generates tenascin variants with different numbers of fibronectin type III repeats. We have used degenerate primers and PCR to isolate a novel tenascin exon from an avian genomic library. Genomic clones contained a
Visualization, Search, and Error Analysis for Coreference Annotations
Learning Structured Perceptrons for Coreference Resolution with Latent Antecedents and Non-local Features
Energy and virtuality scale dependence in quark and gluon jets
We discuss some important issues concerning multiplicities in quark and gluon jets in e+e- annihilation. In QCD the properties of a jet in general depend on two scales, the energy and virtuality of the jet. Frequently theoretical predictions apply to a situation where these scales coincide, while for experimental data they are often different. Thus an analysis to extract e.g. the asymptotic multip
Tenascin-C expression by fibroblasts is elevated in stressed collagen gels
Chick embryo fibroblasts cultured on a collagen matrix exert tractional forces leading to the contraction of unrestrained, floating collagen gels and to the development of tension in attached, restrained gels. On a restrained, attached collagen gel the fibroblasts synthesize large quantities of tenascin-C, whereas in a floating, contracting gel tenascin-C synthesis is decreased. This regulation of
Nerve-dependent and -independent tenascin expression in the developing chick limb bud
The extracellular matrix protein, tenascin, appears in a restricted pattern during organ morphogenesis. Tenascin accumulates along developing peripheral nerves as they leave the spinal cord and enter the limb mesenchyme (Wehrle and Chiquet, Development 110, 401-415, 1990). Here we found that most but not all tenascin deposited along growing nerves is of glial origin. By in situ hybridization with
Stacking or Supertagging for Dependency Parsing -- What's the Difference?
Epithelial synthesis of tenascin at tips of growing bronchi and graded accumulation in basement membrane and mesenchyme
The extracellular matrix protein, tenascin, has been proposed as mediator in epithelial-mesenchymal interactions because of its characteristic distribution during embryogenesis. Here we compared the accumulation of tenascin and laminin in the early chicken lung bud. Laminin is deposited in the basement membrane, starting at the tips and increasing along the shafts of growing primary and secondary
Non-Deterministic Oracles for Unrestricted Non-Projective Transition-Based Dependency Parsing
How to Train Dependency Parsers with Inexact Search for Joint Sentence Boundary Detection and Parsing of Entire Documents
Graduate education initiatives for interdisciplinary research on aging and health in Sweden
Spray layer-by-layer films based on phospholipid vesicles aiming sensing application via e-tongue system
The Layer-by-Layer (LbL) technique via spraying (spray-LbL) has been applied as new and alternative methodology to fabricate ultrathin films due to its versatility in relation to the conventional dipping-LbL method, mainly in terms of faster layer deposition and larger coated area. In this work, the possibility of immobilizing vesicles of dipalmitoyl phosphatidyl glycerol (DPPG) phospholipid onto
The Equations of Motion of Compact Binaries in the Neighborhood of Supermassive Black Hole
Physical vapor deposited thin films of lignins extracted from sugar cane bagasse : Morphology, electrical properties, and sensing applications
The concern related to the environmental degradation and to the exhaustion of natural resources has induced the research on biodegradable materials obtained from renewable sources, which involves fundamental properties and general application. In this context, we have fabricated thin films of lignins, which were extracted from sugar cane bagasse via modified organosolv process using ethanol as org
Study of the interaction between cardiolipin bilayers and methylene blue in polymer-based Layer-by-Layer and Langmuir films applied as membrane mimetic systems
An increase of the reports involving mimetic systems has been observed. Briefly, these systems use biological phospholipids to exploit specific interactions between membrane-models and drugs. Here, the Layer-by-Layer (LbL) and Langmuir techniques were used to investigate the interaction between cardiolipin (CLP - negative phospholipid) and a cationic-like drug methylene blue (MB). Supported by a c
The future of interdisciplinary and cross-national graduate education on aging and health
Isolation and characterization of a resident tolerant Saccharomyces cerevisiae strain from a spent sulfite liquor fermentation plant
Spent Sulfite Liquor (SSL) from wood pulping facilities is a sugar rich effluent that can be used as feedstock for ethanol production. However, depending on the pulping process conditions, the release of monosaccharides also generates a range of compounds that negatively affect microbial fermentation. In the present study, we investigated whether endogenous yeasts in SSL-based ethanol plant could