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Identification of six new susceptibility loci for invasive epithelial ovarian cancer

Genome-wide association studies (GWAS) have identified 12 epithelial ovarian cancer (EOC) susceptibility alleles. The pattern of association at these loci is consistent in BRCA1 and BRCA2 mutation carriers who are at high risk of EOC. After imputation to 1000 Genomes Project data, we assessed associations of 11 million genetic variants with EOC risk from 15,437 cases unselected for family history

Study of jet shapes in inclusive jet production in pp collisions at root s=7 TeV using the ATLAS detector

Jet shapes have been measured in inclusive jet production in proton-proton collisions at root s = 7 TeV using 3 pb(-1) of data recorded by the ATLAS experiment at the LHC. Jets are reconstructed using the anti-k(t) algorithm with transverse momentum 30 GeV < p(T) < 600 GeV and rapidity in the region vertical bar y vertical bar < 2.8. The data are corrected for detector effects and compared to seve

Sex-specific SOD levels and DNA damage in painted dragon lizards (Ctenophorus pictus)

When groups of individuals differ in activities that may influence the production of reactive molecules, such as superoxide, we expect selection to result in congruent upregulation of antioxidant production in the group(s) most at risk of suffering concomitant erosion of essential tissue and biomolecules, such as DNA. We investigate this in a (near) annual lizard species, the Australian painted dr

How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?

This report highlights the potential of measurement, monitoring, modeling and control ((MC)-C-3) methodologies in animal and human cell culture technology. In particular, state-of-the-art of (MC)-C-3 technologies and their industrial relevance of existing technology are addressed. It is a summary of an expert panel discussion between biotechnologists and biochemical engineers with both academic an

Branched nanotrees with immobilized acetylcholine esterase for nanobiosensor applications.

A novel lab-on-a-chip nanotree enzyme reactor is demonstrated for the detection of acetylcholine. The reactors are intended for use in the RISFET (regional ion sensitive field effect transistor) nanosensor, and are constructed from gold-tipped branched nanorod structures grown on SiN(x)-covered wafers. Two different reactors are shown: one with simple, one-dimensional nanorods and one with branche

Low-Temperature CO Oxidation on Ni(111) and on a Au/Ni(111) Surface Alloy

From an interplay between scanning tunneling microscopy, temperature programmed desorption, X-ray photoelectron spectroscopy, and density functional theory calculations we have studied low-temperature CO oxidation on Au/Ni(111) surface alloys and on Ni(111). We show that an oxide is formed on both the Ni(111) and the Au/Ni(111) surfaces when oxygen is dosed at 100 K, and that CO can be oxidized at

Seasonal patterns in Arctic planktonic metabolism (Fram Strait - Svalbard region)

The metabolism of the Arctic Ocean is marked by extremely pronounced seasonality and spatial heterogeneity associated with light conditions, ice cover, water masses and nutrient availability. Here we report the marine planktonic metabolic rates (net community production, gross primary production and community respiration) along three different seasons of the year, for a total of eight cruises alon

Semisynthesis of SY-1 for Investigation of Breast Cancer Stem Cell Selectivity of C-Ring-Modified Salinomycin Analogues.

Salinomycin, a naturally occurring polyether ionophore was recently found to selectively reduce the proportion of CD44(+)/CD24(-) cells, a phenotype associated with breast cancer stem cells. Subsequent studies from our group showed that chemical modification of the allylic C20 hydroxyl of salinomycin, located at the C-ring, can enhance the activity of derivatives against breast cancer cells over 5

Latent analysis of unmodified biomolecules and their complexes in solution with attomole detection sensitivity

The study of biomolecular interactions is central to an understanding of function, malfunction and therapeutic modulation of biological systems, yet often involves a compromise between sensitivity and accuracy. Many conventional analytical steps and the procedures required to facilitate sensitive detection, such as the incorporation of chemical labels, are prone to perturb the complexes under obse

Cysteinyl leukotrienes and their receptors: Bridging inflammation and colorectal cancer.

Long-standing inflammation has emerged as a hallmark of neoplastic transformation of epithelial cells and may be a limiting factor of successful conventional tumor therapies. A complex milieu composed of distinct stromal and immune cells, soluble factors and inflammatory mediators plays a crucial role in supporting and promoting various types of cancers. An augmented inflammatory response can pred

Temperature-controlled kinetics of the growth and relaxation of alcohol clusters in an argon matrix

The clustering processes of monohydric alcohols (from methanol to hexanol) were investigated by FTIR spectroscopy using the isolation in an argon matrix technique. The transformation of the FTIR bands of the free O-H groups (3600-3800 cm(-1)) into diffuse bands (3000-3600 cm(-1)), which were assigned to the stretching vibrations of the H-bonded O-H groups in various clusters, was monitored in its

Power mapping with dynamical adjustment for improved portfolio optimization

For financial risk management it is of vital interest to have good estimates for the correlations between the stocks. It has been found that the correlations obtained from historical data are covered by a considerable amount of noise, which leads to a substantial error in the estimation of the portfolio risk. A method to suppress this noise is power mapping. It raises the absolute value of each ma

On Molecular Classification of Bladder Cancer: Out of One, Many.

Comparative analysis showed that bladder cancer classification systems identify overlapping subtypes but at different levels. Muscle-invasive bladder cancer shows remarkable heterogeneity, and six subtypes were identified that differ in transcriptional networks, marker profiles, and expression of actionable targets.

Deciphering the mode of action of the processive polysaccharide modifying enzyme dermatan sulfate epimerase 1 by hydrogen-deuterium exchange mass spectrometry

Distinct from template-directed biosynthesis of nucleic acids and proteins, the enzymatic synthesis of heterogeneous polysaccharides is a complex process that is difficult to study using common analytical tools. Therefore, the mode of action and processivity of those enzymes are largely unknown. Dermatan sulfate epimerase 1 ( DS-epi1) is the predominant enzyme during the formation of iduronic acid

Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota)

The resolution of the phylogenetic relationships within the order Teloschistales (Ascomycota, lichen-forming-fungi), with nearly 2000 known species and outstanding phenotypic diversity, has been hindered by the limitation in the resolving power that single-locus or two-locus phylogenetic studies have provided to date. In this context, an extensive taxon sampling within the Teloschistales with more

Low complexity likelihood information generation for spatial-multiplexing MIMO signal detection

Abstract in UndeterminedSignal detection algorithms providing likelihood informationfor coded spatial-multiplexing multiple-input multipleoutput(MIMO) wireless communication system pose a criticaldesign challenge due to their prohibitively high computationalcomplexity. In this paper, we present a low-complexity soft-outputdetection algorithm by adopting four implementation-friendlyalgorithm-level

High-resolution genomic and expression analyses of copy number alterations in HER2-amplified breast cancer

Introduction: HER2 gene amplification and protein overexpression (HER2+) define a clinically challenging subgroup of breast cancer with variable prognosis and response to therapy. Although gene expression profiling has identified an ERBB2 molecular subtype of breast cancer, it is clear that HER2+ tumors reside in all molecular subtypes and represent a genomically and biologically heterogeneous gro

The tumour suppressor miR-34c targets MET in prostate cancer cells.

Background:The microRNA, miR-34c, is a well-established regulator of tumour suppression. It is downregulated in most forms of cancers and inhibits malignant growth by repressing genes involved in processes such as proliferation, anti-apoptosis, stemness, and migration. We have previously reported downregulation and tumour suppressive properties for miR-34c in prostate cancer (PCa).Methods:In this